Record added by Jurg Ott (the original Rockefeller list)
Bayesian Epistasis Association Mapping
BEAM treats the disease-associated markers and their interactions via a bayesian partitioning model and computes, via Markov chain Monte Carlo, the posterior probability that each marker set is associated with the disease.
Jun S Liu (Harvard University)
http://www.people.fas.harvard.edu/~junliu/BEAM/
C++
UNIX, Linux, DOS
Zhang, Liu (2007), “Bayesian inference of epistatic interactions in case-control studies”, Nature, 39:1167-1173.