APE

Record added by Jurg Ott (the original Rockefeller list)

Full Name

Allelic Path Explorer

Version

1.0

Description

Extends partially observed genotype data to the whole pedigree. Can be used for generating starting points for MCMC samplers and for checking that the genotype data are consistent with the pedigree structure.

Author

  • Matti Pirinen

  • Dario Gasbarra (University of Helsinki, Finland)

    URL

    http://www.helsinki.fi/~mpirinen/download

    Language

    C

    OS

    UNIX

    Reference

    Pirinen, Gasbarra (2006), “Finding consistent gene transmission patterns on large and complex pedigrees”, IEEE/ACM cransactions on Computational Biology and Bioinformatics, 3(3):252-262