HTR

Record added by Jurg Ott (the original Rockefeller list)

Full Name

Haplotype Trend Regression

Version

Aug 2002

Description

Haplotype association mapping using unrelated individuals; “fixed” and “sliding” window analysis; overall tests and tests for individual haplotype effects

Author

Dmitri Zaykin

URL

  • http://statgen.ncsu.edu/zaykin/htr.html

  • ftp://statgen.ncsu.edu/pub/zaykin/htr/

    Language

    C++, Bash shell

    OS

    Window, UNIX(Solaris)

    EXE

    emgi.exe (fixed number of markers), bash emgi.sh (sliding window)

    Reference

    Zaykin DV, Westfall PH, Young SS, Karnoub MC, Wagner MJ, Ehm MG (2002), “Testing association of statistically inferred haplotypes with discrete and continuous traits in samples of unrelated individuals”, Human Heredity, 53:79-91.