S


  1. SAGE, Statistical Analysis for Genetic Epidemiology
  2. SAMTOOLS, Sequence Alignment/Map TOOLS
  3. SAS/GENETICS
  4. SASGENE
  5. SASQUANT
  6. SCORE-SEQ, SCORE-type tests for detecting disease associations with rare variants in SEQuencing Studies
  7. SCOUT
  8. SDMINP, Step-Down MIN P-value
  9. SEGPATH, SEGregation analysis and PATH analysis
  10. SELSIM
  11. SEQUENCE LD/SEQUENCE LDHOT
  12. SGS
  13. SIB-PAIR
  14. SIBERROR, SibError
  15. SIBLINK
  16. SIBMED, SIBling Mutation and Error Detection
  17. SIBSIM
  18. SIFT, Sorting Intolerant From Tolerant
  19. SILCLOD, SIgnificance Levels and Critical LODs
  20. SIMCOAL, SIMulate COAlescence
  21. SIMHAP, SIMulation-based HAPlotypic analysis
  22. SIMIBD
  23. SIMLA, SIMulation of pedigree data for Linkage and Association studies
  24. SIMLA 3
  25. SIMLINK
  26. SIMM
  27. SIMPED
  28. SIMPLE, Sequential Imputation for MultiPoint Linkage Estimation
  29. SIMULAPLOT
  30. SIMULATE
  31. SIMUPOP
  32. SIMWALK
  33. SKAT, SNP-set (Sequence) Kernel Association Test
  34. SLINK
  35. SMOOTH
  36. SNAP, Suite of Nucleotide Analysis Programs
  37. SNAP 2, SNp Annotation and Proxy search
  38. SNAP 3, Simulation of sNp haplotype data And Phenotypic traits
  39. SNIPPEEP
  40. SNP ASSISTANT
  41. SNP CHART
  42. SNP HITLINK, SNP HIgh-Throughput LINKage analysis system
  43. SNP-HWE
  44. SNP.PLOTTER
  45. SNPALYZE
  46. SNPEM, SNP Expectation Maximization
  47. SNPFILE
  48. SNPHAP
  49. SNPHARVESTER
  50. SNPLINK
  51. SNPMSTAT, SNP Missing data STATistics
  52. SNPP, Single Nucleotide Polymorphism Processor
  53. SNPSTATS, SNP STATisticS
  54. SNPTEST
  55. SOAP, Short Oligonucleotide Analysis Package
  56. SOLAR, Sequential Oligogenic Linkage Analysis Routines
  57. SPAM, Statistics Program for Analysing Mixtures
  58. SPECTRAL-GEM
  59. SPERM
  60. SPERMSEG
  61. SPIP, Simulate Pedigree In Population
  62. SPLAT, Sib Pair Linkage Analysis Testing
  63. SPLINK, affected Sib Pairs LINKage analysis
  64. SPREG, Secondary Phenotype REGression analysis
  65. SQTDT/SPDT
  66. SQTL, Semiparametric QTL mapping in general pedigrees
  67. sQTLSeekerR
  68. SSAHASNP, Sequence Search and Alignment by Hashing Algorithm for SNP detection
  69. START
  70. STEPC, STatistical Explanation for Positional Cloning
  71. STEPWISE
  72. STRAT
  73. STRUCTURE
  74. SUMSTAT
  75. SUP, Slink Utility Program
  76. SUPERLINK
  77. SVA, Sequence Variant Analyzer
  78. SVCC, Semiparametric Variance-Component for Censored data
  79. SWEEP
  80. SYZYGY