Record added by Jurg Ott (the original Rockefeller list)
HelixTree Genetic Association Software
Comprehensive toolset for population-based association studies. Perform allele, genotype, haplotype, multi-locus, runs of homozygosity, copy number variation, and regression-based association analysis on case-control, quantitative trait, and categorical type data.
Download request for free trial available at http://www.goldenhelix.com/SNP_Variation/svstrial.html
MS-Windows, Linux, MacOS X
Zaykin, Westfall, Young, Karnoub, Wagner, Ehm (2002), “Testing association of statistically inferred haplotypes with discrete and continuous traits in samples of unrelated individuals”, Human Heredity, 53:79-91.
Recursive Partitioning, A Bibliography http://www.goldenhelix.com/download/pdfs/RPbibliography.pdf
Academic pricing available. Please contact Golden Helix, Inc. at email@example.com