R/ONEMAP

Record added by Jurg Ott (the original Rockefeller list)

Version

1.0-1 (April 2009)

Description

ONEMAP is an environment for constructing linkage maps in outcrossing plant species, using full-sib families derived from two outbreed (non-inbreeding) parent plants.

Author

  • Gabriel Rodrigues Alves Margarido
  • Anete Pereira de Souza

  • Antonio Augusto Franco Garcia (email: aafgarci@esalq.usp.br)

    URL

  • http://www.ciagri.usp.br/~aafgarci/OneMap/

  • http://cran.r-project.org/web/packages/onemap/index.html

    Language

    R

    EXE

    load.onemap, read.outcross, extract.group, remove.marker, arbitr.rf.2pts, est.rf.2pts, modigy.rf.2pts, group, map, make.map, est.rf.3pts

    Reference

    Garcia, Kido, Meza, Souza, Pinto, Pastina, Leite, Silva, Ulian, Figueira, Souza (2006), “Development of an integrated genetic map of a sugarcane (Saccharum spp.) commercial cross, based on a maximum-likelihood approach for estimation of linkage and linkage phases”, Theoretical and Applied Genetics, 112:298-314.