SVA

Record added by Jurg Ott (the original Rockefeller list)

Full Name

Sequence Variant Analyzer

Version

v1.10 (March 2011)

Description

SVA is a software tool that assigns a predicted biological function to variants identified in next-generation sequencing studies and provides a browser to visualize the variants in their genomic contexts. SVA also provides for flexible interaction with software implementing variant association tests allowing users to consider both the bioinformatic annotation of identified variants and the strength of their associations with studied traits.

Author

  • Dongliang Ge

  • David Goldstein (Duke)

URL

http://www.svaproject.org/

Reference

Ge,Ruzzo, Shianna,He,Pelak, Heinzen, Need, Cirulli, Maia, Dickson, Zhu,Singh, Allen, Goldstein (2011), “SVA: software for annotating and visualizing sequenced human genomes”, Bioinformatics, 27:1998-2000.